Browsing by Author "Kim, J"

Now showing 1 - 7 of 7

Embargo
Comparative quantifications and morphological monitoring of the topical treatment approach for onychomycosis-affected in vivo toenail using optical coherence tomography: A case study
(Elsevier Ltd, 2024-02) Saleah, S.S; Gu, Y; Wijesinghe, R.E; Seong, D; Cho, H; Jeon, M; Kim, J
Onychomycosis is one of the most common toenail fungal infections that affect the quality of life of many patients. Long-term and noninvasive monitoring of morphological changes of onychomycosis-affected nail plate aids the medication process and provides comfort for patients. However, existing medical and dermatological imaging methods have various types of limitations in nail investigation due to low resolution, lack of volumetric data, the necessity of highly trained personnel for image analysis, and the variety of protocols. In this study, qualitative monitoring-based quantitative assessments were performed to assess the morphological changes of onychomycosis-affected toenail for 15 consecutive weeks using high-resolution optical coherence tomography (OCT). Layer intensity and surface roughness measuring algorithms were applied to two-dimensional OCT cross-sectional images to detect gradual changes in the morphological structure of the diseased toenail. A depth intensity profile and the angle formed between the nail plate and nail fold were also used to analyze the thickness and shape of the toenail plates, respectively. The quantitative and morphological monitoring results revealed significant changes in the toenail structure before and during the treatment process, confirming the healing of the diseased toenail. Therefore, the proposed noninvasive optical analysis approach can be applied to monitor nail abnormalities and evaluate the process of diseased toenail medication
Embargo
Comparative quantifications and morphological monitoring of the topical treatment approach for onychomycosis-affected in vivo toenail using optical coherence tomography: A case study
(Elsevier, 2023-10-19) Saleah, S. A; Gu, Y; Wijesinghe, R.E; Seong, D; Cho, H; Jeon, M; Kim, J
Onychomycosis is one of the most common toenail fungal infections that affect the quality of life of many patients. Long-term and noninvasive monitoring of morphological changes of onychomycosis-affected nail plate aids the medication process and provides comfort for patients. However, existing medical and dermatological imaging methods have various types of limitations in nail investigation due to low resolution, lack of volumetric data, the necessity of highly trained personnel for image analysis, and the variety of protocols. In this study, qualitative monitoring-based quantitative assessments were performed to assess the morphological changes of onychomycosis-affected toenail for 15 consecutive weeks using high-resolution optical coherence tomography (OCT). Layer intensity and surface roughness measuring algorithms were applied to two-dimensional OCT cross-sectional images to detect gradual changes in the morphological structure of the diseased toenail. A depth intensity profile and the angle formed between the nail plate and nail fold were also used to analyze the thickness and shape of the toenail plates, respectively. The quantitative and morphological monitoring results revealed significant changes in the toenail structure before and during the treatment process, confirming the healing of the diseased toenail. Therefore, the proposed noninvasive optical analysis approach can be applied to monitor nail abnormalities and evaluate the process of diseased toenail medication.
Open Access
Dense Convolutional Neural Network-Based Deep Learning Pipeline for Pre-Identification of Circular Leaf Spot Disease of Diospyros kaki Leaves Using Optical Coherence Tomography
(Multidisciplinary Digital Publishing Institute (MDPI), 2024-08) Kalupahana, D; Kahatapitiya, N.S; Silva, B.N; Kim, J; Jeon, M; Wijenayake, U; Wijesinghe, R. E
Circular leaf spot (CLS) disease poses a significant threat to persimmon cultivation, leading to substantial harvest reductions. Existing visual and destructive inspection methods suffer from subjectivity, limited accuracy, and considerable time consumption. This study presents an automated pre-identification method of the disease through a deep learning (DL) based pipeline integrated with optical coherence tomography (OCT), thereby addressing the highlighted issues with the existing methods. The investigation yielded promising outcomes by employing transfer learning with pre-trained DL models, specifically DenseNet-121 and VGG-16. The DenseNet-121 model excels in differentiating among three stages of CLS disease (healthy (H), apparently healthy (or healthy-infected (HI)), and infected (I)). The model achieved precision values of 0.7823 for class-H, 0.9005 for class-HI, and 0.7027 for class-I, supported by recall values of 0.8953 for class-HI and 0.8387 for class-I. Moreover, the performance of CLS detection was enhanced by a supplemental quality inspection model utilizing VGG-16, which attained an accuracy of 98.99% in discriminating between low-detail and high-detail images. Moreover, this study employed a combination of LAMP and A-scan for the dataset labeling process, significantly enhancing the accuracy of the models. Overall, this study underscores the potential of DL techniques integrated with OCT to enhance disease identification processes in agricultural settings, particularly in persimmon cultivation, by offering efficient and objective pre-identification of CLS and enabling early intervention and management strategies. © 2024 by the authors.
Open Access
Label-free visualization of internal organs and assessment of anatomical differences among adult Anopheles, Aedes, and Culex mosquito specimens using bidirectional optical coherence tomography
(Elsevier, 2023-08-02) Luna, J.A; Ravichandran, N.K; Saleah, S. A; Wijesinghe, R.E; Seong, D; Choi, K.S; Jung, H.Y; Jeon, M; Kim, J
Mosquitoes transmit several fatal human diseases and constitute a global threat to the fight against infectious diseases. Thus, it is crucial to identify the diseases transmitted by mosquitoes, analyze their internal organs, investigate the life cycles of the viruses and pathogens they carry, and elucidate the anatomical changes they cause inside the host without dissecting them. Here we have demonstrated a method for label-free visualization of the internal organs of adult Anopheles, Aedes, and Culex mosquitoes using swept-source optical coherence tomography (SS-OCT). To overcome the limitation of depth-dependent signal-to-noise ratio (SNR) reduction, imaging was conducted using a dynamic rotational OCT scanner to acquire images of the top and bottom surfaces of the specimens. The internal structure and organ images of all the mosquito specimens had constant resolvability and higher SNR than in those obtained via conventional OCT. Furthermore, a depth profiling algorithm was developed to obtain quantitative information about the internal organs. Several internal organs, such as the salivary glands, heart, midgut, dorsal and ventral crop, and abdominal ganglia, were precisely identified and analyzed noninvasively using OCT. The average thicknesses of the heart, midgut, dorsal and ventral crop, and abdominal ganglia of Anopheles, Aedes, and Culex mosquitoes were 72.1, 107.3, 87.3, and 63.4 μm, respectively. This study demonstrates the applicability of OCT in entomology research for high-resolution microscopic analysis. The findings of this study can guide future studies requiring nondestructive assessment of internal organs to evaluate the morphological differences among various virus-transmitting mosquito specimens.
Embargo
Non-destructive morphological screening for the assessment of postharvest storage effect on pears stored with apples using optical coherence tomography
(Elsevier GmbH, 2024-04) Luna, J.A; Wijesinghe, R.E; Lee, S.Y; Ravichandran, N.K; Saleah, S.A; Seong, D; Jung, H.Y; Jeon, M; Kim, J
The use of a limited and inadequate storage facility for the storage of multiple food items for an extended period of time results in the loss of structural integrity and freshness while storing fruit in confined single storage without adequate individual packaging methods can result in morphological changes and the degradation of the quality of the fruit. In this study, the effects of postharvest storage on pears co-stored with apples were investigated via non-invasive screening of the structural deformation of pears and the respective anatomical changes of the sub-surface. The anatomical changes were monitored for a prolonged time (12 d) under inadequate and confined storage conditions using swept-source optical coherence tomography (SS-OCT) and the results were comparatively analyzed using appropriately stored specimens. In addition, the OCT cross-sectional images were analyzed for the assessment of the dispersed intensity profile using a customized intensity-based image-processing algorithm. The results revealed the internal morphological variations and corresponding intensity fluctuations, thickness variations, and internal gap formations. This confirmed the potential applicability of OCT as a real-time, non-invasive high-resolution assessment technique for determining fruit quality in diverse environments, such as post-harvest storage and transportation systems.
Open Access
Optical Coherence Imaging Hybridized Deep Learning Framework for Automated Plant Bud Classification in Emasculation Processes: A Pilot Study
(Multidisciplinary Digital Publishing Institute (MDPI), 2025-09-25) Tharaka, D; Withanage, A; Kahatapitiya, N. S; Abhayapala, R; Wijenayake, U; Wijethunge, A; Ravichandran, N. K; Silva, B. N; Jeon, M; Kim, J
A vision-based autonomous system for emasculating okra enhances agriculture by enabling precise flower bud identification, overcoming the labor-intensive, error-prone challenges of traditional manual methods with improved accuracy and efficiency. This study presents a framework for an adaptive, automated bud identification method to assist the emasculation process, hybridized optical coherence tomography (OCT). Three YOLOv8 variants were evaluated for accuracy, detection speed, and frame rate to identify the most efficient model. To strengthen the findings, YOLO was hybridized with OCT, enabling non-invasive sub-surface verification and precise quantification of the emasculated depth of both sepal and petal layers of the flower bud. To establish a solid benchmark, gold standard color histograms and a digital imaging-based method under optimal lighting conditions with confidence scoring were also employed. The results demonstrated that the proposed method significantly outperformed these conventional frameworks, providing superior accuracy and layer differentiation during emasculation. Hence, the developed YOLOv8 hybridized OCT method for flower bud identification and emasculation offers a powerful tool to significantly improve both the precision and efficiency of crop breeding practices. This framework sets the stage for implementing scalable, artificial intelligence (AI)-driven strategies that can modernize and optimize traditional crop breeding workflows.
Open Access
Recent Technological Progress of Fiber-Optical Sensors for Bio-Mechatronics Applications
(MDPI, 2023-11-07) Abdhul Rahuman, M.A; Kahatapitiya, N.S; Amarakoon, V.N; Wijenayake, U; Silva, B.N; Jeon, M; Kim, J; Ravichandran, N.K; Wijesinghe, R.E
Bio-mechatronics is an interdisciplinary scientific field that emphasizes the integration of biology and mechatronics to discover innovative solutions for numerous biomedical applications. The broad application spectrum of bio-mechatronics consists of minimally invasive surgeries, rehabilitation, development of prosthetics, and soft wearables to find engineering solutions for the human body. Fiber-optic-based sensors have recently become an indispensable part of bio-mechatronics systems, which are essential for position detection and control, monitoring measurements, compliance control, and various feedback applications. As a result, significant advancements have been introduced for designing and developing fiber-optic-based sensors in the past decade. This review discusses recent technological advancements in fiber-optical sensors, which have been potentially adapted for numerous bio-mechatronic applications. It also encompasses fundamental principles, different types of fiber-optical sensors based on recent development strategies, and characterizations of fiber Bragg gratings, optical fiber force myography, polymer optical fibers, optical tactile sensors, and Fabry–Perot interferometric applications. Hence, robust knowledge can be obtained regarding the technological enhancements in fiber-optical sensors for bio-mechatronics-based interdisciplinary developments. Therefore, this review offers a comprehensive exploration of recent technological advances in fiber-optical sensors for bio-mechatronics. It provides insights into their potential to revolutionize biomedical and bio-mechatronics applications, ultimately contributing to improved patient outcomes and healthcare innovation.